ENSDARG00000063009


Danio rerio

Features
Gene ID: ENSDARG00000063009
  
Biological name :catip
  
Synonyms : catip / ciliogenesis associated TTC17 interacting protein / Q08CH6
  
Possible biological names infered from orthology : B9EKE5 / Ciliosis-associated TTC17-interacting protein / Q7Z7H3
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 13039951
Gene end: 13045541
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086133
Ensembl peptide - ENSDARP00000128088
NCBI entrez gene - 767803     See in Manteia.
RefSeq - NM_001076770
RefSeq Peptide - NP_001070238
swissprot - Q08CH6
swissprot - X1WCZ1
ZFIN ID - ZDB-GENE-060929-1170
Ensembl - ENSDARG00000063009
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CATIPENSGALG00000045119Gallus gallus
 CATIPENSG00000158428Homo sapiens
 CatipENSMUSG00000073650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003117  cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030041 actin filament polymerization IMP
 biological_processGO:0044782 cilium organization IMP
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:0061371 determination of heart left/right asymmetry IMP
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0015629 actin cytoskeleton ISS
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain malformed , abnormal
brain necrotic , abnormal
Show

 ZFA:0000022 floor plate floor plate undulate , abnormal
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 ZFA:0000047 peripheral olfactory organ peripheral olfactory organ has fewer parts of type ciliated olfactory receptor neuron , abnormal
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 ZFA:0000107 eye eye malformed , abnormal
eye decreased size , abnormal
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 ZFA:0000114 heart heart mislocalised , abnormal
heart edematous , abnormal
Show

 ZFA:0000135 notochord notochord undulate , abnormal
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 ZFA:0000217 inner ear inner ear decreased size , abnormal
Show

 ZFA:0001058 caudal fin caudal fin curved , abnormal
Show

 ZFA:0001094 whole organism whole organism curved , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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