ENSDARG00000063292


Danio rerio

Features
Gene ID: ENSDARG00000063292
  
Biological name :ssuh2rs1
  
Synonyms : Q08C76 / ssu-2 homolog, related sequence 1 / ssuh2rs1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 7311478
Gene end: 7352278
  
Corresponding Affymetrix probe sets: Dr.17965.2.A1_at (Zebrafish Array)   Dr.5162.1.A1_at (Zebrafish Array)   NM_001076658_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000113094
Ensembl peptide - ENSDARP00000151445
Ensembl peptide - ENSDARP00000122839
Ensembl peptide - ENSDARP00000086779
NCBI entrez gene - 767720     See in Manteia.
RefSeq - NM_001076658
RefSeq Peptide - NP_001070126
swissprot - E9QJK4
swissprot - E9QH76
swissprot - Q08C76
ZFIN ID - ZDB-GENE-060929-994
Ensembl - ENSDARG00000063292
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ssuh2.2 / ssu-2 homolog, tandem duplicate 2ENSDARG0000005441847
ssuh2.4 / ssu-2 homolog, tandem duplicate 4ENSDARG0000005482747
ssuh2.3 / ssu-2 homolog, tandem duplicate 3ENSDARG0000007661424
ssuh2.1 / ssu-2 homolog, tandem duplicate 1 / Ssu2* / SSUH2* / Q9Y2M2* / Q8C3L1* / ssu-2 homolog (C. elegans)* / Mus musculus ssu-2 homolog (C. elegans) (Ssu2), transcript variant 2, mRNA.*ENSDARG0000004093812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001305  Heat shock protein DnaJ, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042476 odontogenesis IMP
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000694 ceratobranchial 5 tooth ceratobranchial 5 tooth absent , abnormal
ceratobranchial 5 tooth decreased amount , abnormal
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 ZFA:0001153 tooth placode tooth placode spatial pattern , abnormal
tooth placode absent , abnormal
tooth placode decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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