ENSDARG00000063414


Danio rerio

Features
Gene ID: ENSDARG00000063414
  
Biological name :rxylt1
  
Synonyms : Q08CD5 / ribitol xylosyltransferase 1 / rxylt1
  
Possible biological names infered from orthology : Q8VDX6 / Q9Y2B1 / Tmem5 / transmembrane protein 5
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 13063210
Gene end: 13121983
  
Corresponding Affymetrix probe sets: Dr.15817.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000087080
NCBI entrez gene - 557187     See in Manteia.
RefSeq - NM_001075112
RefSeq Peptide - NP_001068580
swissprot - Q08CD5
ZFIN ID - ZDB-GENE-060929-1018
Ensembl - ENSDARG00000063414
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM5ENSGALG00000009815Gallus gallus
 Q9Y2B1ENSG00000118600Homo sapiens
 Tmem5ENSMUSG00000034620Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004263  Exostosin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0035269 protein O-linked mannosylation ISS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0120053 ribitol beta-1,4-xylosyltransferase activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
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 ZFA:0000107 eye eye decreased width , abnormal
Show

 ZFA:0001056 myotome myotome sarcolemma broken , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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