ENSDARG00000063555


Danio rerio
zincfingerringfyvephd-typech-typenucleicacidbinding

Features
Gene ID: ENSDARG00000063555
  
Biological name :si:ch211-166g5.4
  
Synonyms : si:ch211-166g5.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 3766557
Gene end: 3778848
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000087415
Ensembl peptide - ENSDARP00000127012
swissprot - F1RDH0
swissprot - R4GEU9
ZFIN ID - ZDB-GENE-121214-319
Ensembl - ENSDARG00000063555
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
maza / MYC-associated zinc finger protein a (purine-binding transcription factor)ENSDARG0000008733059
vezf1a / vascular endothelial zinc finger 1a / VEZF1* / Q14119* / vascular endothelial zinc finger 1*ENSDARG0000000824734
vezf1b / vascular endothelial zinc finger 1b / VEZF1* / Q14119* / vascular endothelial zinc finger 1*ENSDARG0000006103033
patz1 / POZ (BTB) and AT hook containing zinc finger 1 / Q9HBE1* / POZ-, AT hook-, and zinc finger-containing protein 1 isoform 3 *ENSDARG0000007658428


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
organic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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