ENSDARG00000067796


Danio rerio

Features
Gene ID: ENSDARG00000067796
  
Biological name :clpxb
  
Synonyms : caseinolytic mitochondrial matrix peptidase chaperone subunit b / clpxb
  
Possible biological names infered from orthology : ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial / caseinolytic mitochondrial matrix peptidase chaperone subunit / CLPX / O76031 / Q9JHS4
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 35565590
Gene end: 35599887
  
Corresponding Affymetrix probe sets: Dr.5196.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000128070
Ensembl peptide - ENSDARP00000147462
Ensembl peptide - ENSDARP00000156842
NCBI entrez gene - 100332309     See in Manteia.
swissprot - E7F9J1
ZFIN ID - ZDB-GENE-130404-1
Ensembl - ENSDARG00000067796
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLPXENSGALG00000007289Gallus gallus
 CLPXENSG00000166855Homo sapiens
 ClpxENSMUSG00000015357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clpxa / caseinolytic mitochondrial matrix peptidase chaperone subunit a / CLPX* / O76031* / caseinolytic mitochondrial matrix peptidase chaperone subunit*ENSDARG0000002906382


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR004487  Clp protease, ATP-binding subunit ClpX
 IPR019489  Clp ATPase, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006508 proteolysis IBA
 biological_processGO:0030163 protein catabolic process IBA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0004176 ATP-dependent peptidase activity IBA
 molecular_functionGO:0005524 ATP binding IBA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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