ENSDARG00000067851


Danio rerio

Features
Gene ID: ENSDARG00000067851
  
Biological name :lcn15
  
Synonyms : lcn15 / lipocalin 15
  
Possible biological names infered from orthology : AL807752.7 / O09114 / P41222 / prostaglandin D2 synthase / Prostaglandin-H2 D-isomerase / PTGDS
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 65991152
Gene end: 66001200
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088527
NCBI entrez gene - 751703     See in Manteia.
RefSeq - NM_001045415
RefSeq Peptide - NP_001038880
swissprot - Q0P3U6
ZFIN ID - ZDB-GENE-060825-349
Ensembl - ENSDARG00000067851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTGDSENSGALG00000030886Gallus gallus
 AL807752.7ENSG00000284341Homo sapiens
 PTGDSENSG00000107317Homo sapiens
 PtgdsENSMUSG00000015090Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptgdsa / prostaglandin D2 synthase a / PTGDS* / O09114* / P41222* / AL807752.7* / prostaglandin D2 synthase* / Prostaglandin-H2 D-isomerase *ENSDARG0000006943937
ptgdsb.1 / prostaglandin D2 synthase b, tandem duplicate 1 / PTGDS* / O09114* / P41222* / AL807752.7* / prostaglandin D2 synthase* / Prostaglandin-H2 D-isomerase *ENSDARG0000002708821
zgc:153704 / PTGDS* / P41222* / AL807752.7* / prostaglandin D2 synthase*ENSDARG0000004597919
ptgdsb.2 / prostaglandin D2 synthase b, tandem duplicate 2 / PTGDS* / O09114* / P41222* / AL807752.7* / prostaglandin D2 synthase* / Prostaglandin-H2 D-isomerase *ENSDARG0000007162619


Protein motifs (from Interpro)
Interpro ID Name
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR002345  Lipocalin
 IPR002972  Prostaglandin D synthase
 IPR012674  Calycin
 IPR022272  Lipocalin family conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0036094 small molecule binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of Prostaglandins (PG) and Thromboxanes (TX)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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