ENSDARG00000068374


Danio rerio
regulationclock-interactingpacemakercircadianrhythmtranscriptiondna-templated

Features
Gene ID: ENSDARG00000068374
  
Biological name :si:ch211-132b12.7
  
Synonyms : si:ch211-132b12.7
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 40668615
Gene end: 40684792
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099316
Ensembl peptide - ENSDARP00000114270
NCBI entrez gene - 564531     See in Manteia.
RefSeq - NM_001045055
RefSeq Peptide - NP_001038520
swissprot - F1RBS7
swissprot - Q1LVI5
ZFIN ID - ZDB-GENE-050419-250
Ensembl - ENSDARG00000068374
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cipcb / CLOCK-interacting pacemaker b / CIPC* / Q9C0C6* / Q8R0W1* / AC007375.2* / CLOCK interacting pacemaker*ENSDARG0000007809515
cipca / CLOCK-interacting pacemaker a / CIPC* / Q9C0C6* / Q8R0W1* / AC007375.2* / CLOCK interacting pacemaker*ENSDARG0000007539714


Protein motifs (from Interpro)
Interpro ID Name
 IPR031602  Clock-interacting pacemaker


Gene Ontology (GO)
circadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcircadian rhythmcircadian rhythmnitrogen compound metabnitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic process
TypeGO IDTermEv.Code
 biological_processGO:0042754 negative regulation of circadian rhythm IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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