ENSDARG00000068641


Danio rerio

Features
Gene ID: ENSDARG00000068641
  
Biological name :taf10
  
Synonyms : taf10 / TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
  
Possible biological names infered from orthology : Q12962 / Q8K0H5 / TATA-box binding protein associated factor 10 / Transcription initiation factor TFIID subunit 10
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 25811892
Gene end: 25817106
  
Corresponding Affymetrix probe sets: Dr.11366.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000090137
Ensembl peptide - ENSDARP00000115515
NCBI entrez gene - 556710     See in Manteia.
RefSeq - NM_001044811
RefSeq Peptide - NP_001038276
swissprot - Q1LVD5
swissprot - Q1LVD6
ZFIN ID - ZDB-GENE-060526-334
Ensembl - ENSDARG00000068641
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF10ENSGALG00000046371Gallus gallus
 TAF10ENSG00000166337Homo sapiens
 Taf10ENSMUSG00000043866Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003923  Transcription initiation factor TFIID, 23-30kDa subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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