ENSDARG00000069373


Danio rerio

Features
Gene ID: ENSDARG00000069373
  
Biological name :crcp
  
Synonyms : calcitonin gene-related peptide-receptor component protein / crcp
  
Possible biological names infered from orthology : CGRP receptor component / O35427 / O75575
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 31244500
Gene end: 31252131
  
Corresponding Affymetrix probe sets: Dr.15889.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000107938
NCBI entrez gene - 751656     See in Manteia.
swissprot - F1QK38
ZFIN ID - ZDB-GENE-060825-150
Ensembl - ENSDARG00000069373
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRCPENSGALG00000002587Gallus gallus
 CRCPENSG00000241258Homo sapiens
 CrcpENSMUSG00000025532Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005574  RNA polymerase subunit RPB4/RPC9
 IPR006590  RNA polymerase Rpb4/RPC9, core
 IPR010997  HRDC-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 biological_processGO:0044237 cellular metabolic process IEA
 biological_processGO:0061484 hematopoietic stem cell homeostasis IMP
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000033 intermediate cell mass of mesoderm intermediate cell mass of mesoderm apoptotic process increased occurrence , abnormal
intermediate cell mass of mesoderm cell proliferation decreased occurrence , abnormal
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 ZFA:0000037 anatomical structure anatomical structure increased amount , abnormal
anatomical structure decreased amount , abnormal
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 ZFA:0001078 thymus thymus decreased amount , abnormal
thymus absent , abnormal
thymus T cell absent , abnormal
thymus hematopoietic multipotent progenitor cell absent , abnormal
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 ZFA:0001115 trunk trunk posterior region decreased amount , abnormal
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 ZFA:0005023 hematopoietic system hematopoietic system posterior region increased amount , abnormal
hematopoietic system posterior region decreased amount , abnormal
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 ZFA:0009354 hematopoietic multipotent progenitor cell hematopoietic multipotent progenitor cell decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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