ENSDARG00000069989


Danio rerio

Features
Gene ID: ENSDARG00000069989
  
Biological name :bnc2
  
Synonyms : basonuclin 2 / bnc2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 27023687
Gene end: 27212459
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000153240
Ensembl peptide - ENSDARP00000155894
Ensembl peptide - ENSDARP00000153254
Ensembl peptide - ENSDARP00000093098
Ensembl peptide - ENSDARP00000104486
Ensembl peptide - ENSDARP00000134074
Ensembl peptide - ENSDARP00000152271
NCBI entrez gene - 559327     See in Manteia.
RefSeq - NM_001327750
RefSeq Peptide - NP_001314679
swissprot - C7DZJ6
swissprot - A9ULS5
swissprot - F1R425
ZFIN ID - ZDB-GENE-030131-5784
Ensembl - ENSDARG00000069989
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048066 developmental pigmentation IMP
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000403 ovary ovary morphology , abnormal
Show

 ZFA:0001094 whole organism whole organism female sterile , abnormal
Show

 ZFA:0001115 trunk trunk melanophore stripe disorganized , abnormal
trunk melanophore stripe absent , abnormal
trunk pigment cell (sensu Vertebrata) decreased amount , abnormal
trunk iridophore decreased amount , abnormal
Show

 ZFA:0001136 hypodermis hypodermis melanocyte decreased amount , abnormal
hypodermis xanthophore decreased amount , abnormal
hypodermis iridophore decreased amount , abnormal
Show

 ZFA:0001463 melanophore stripe melanophore stripe malformed , abnormal
Show

 ZFA:0009090 pigment cell pigment cell quality , abnormal
Show

 ZFA:0009091 melanocyte melanocyte quality , abnormal
melanocyte decreased amount , abnormal
Show

 ZFA:0009170 pigment cell (sensu Vertebrata) pigment cell (sensu Vertebrata) decreased amount , abnormal
Show

 ZFA:0009198 xanthophore xanthophore quality , abnormal
xanthophore decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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