ENSDARG00000070168


Danio rerio

Features
Gene ID: ENSDARG00000070168
  
Biological name :sod3a
  
Synonyms : sod3a / superoxide dismutase 3, extracellular a
  
Possible biological names infered from orthology : O09164 / P08294 / SOD3 / superoxide dismutase 3 / superoxide dismutase 3, extracellular
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 71335815
Gene end: 71339294
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000093532
NCBI entrez gene - 504078     See in Manteia.
RefSeq - NM_001099236
RefSeq Peptide - NP_001092706
swissprot - F1R0Y7
ZFIN ID - ZDB-GENE-050309-208
Ensembl - ENSDARG00000070168
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SOD3ENSGALG00000018557Gallus gallus
 SOD3ENSG00000109610Homo sapiens
 Sod3ENSMUSG00000072941Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sod3b / superoxide dismutase 3, extracellular b / SOD3* / P08294* / O09164* / superoxide dismutase 3* / superoxide dismutase 3, extracellular*ENSDARG0000007918336
sod1 / O73872 / superoxide dismutase 1, soluble / P00441* / P08228* / superoxide dismutase 1* / Superoxide dismutase [Cu-Zn] *ENSDARG0000004384826
ccs / copper chaperone for superoxide dismutase / O14618* / Q9WU84*ENSDARG0000009200323
ccs / copper chaperone for superoxide dismutase / O14618*ENSDARG0000011624623


Protein motifs (from Interpro)
Interpro ID Name
 IPR001424  Superoxide dismutase, copper/zinc binding domain
 IPR018152  Superoxide dismutase, copper/zinc, binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006801 superoxide metabolic process IEA
 biological_processGO:0019430 removal of superoxide radicals IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005615 extracellular space IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004784 superoxide dismutase activity IBA
 molecular_functionGO:0005507 copper ion binding IBA
 molecular_functionGO:0008270 zinc ion binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Detoxification of Reactive Oxygen Species


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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