ENSDARG00000071496


Danio rerio

Features
Gene ID: ENSDARG00000071496
  
Biological name :zic6
  
Synonyms : zic6 / zic family member 6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 32022272
Gene end: 32026099
  
Corresponding Affymetrix probe sets: Dr.22887.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000096538
NCBI entrez gene - 415097     See in Manteia.
RefSeq - NM_001001837
RefSeq Peptide - NP_001001837
swissprot - Q6PWU7
ZFIN ID - ZDB-GENE-061207-1
Ensembl - ENSDARG00000071496
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zic5 / zic family member 5 (odd-paired homolog, Drosophila) / Q96T25* / Zic family member 5* / zinc finger protein of the cerebellum 5*ENSDARG0000001602239
zic4 / zic family member 4 / Q61467* / Q8N9L1* / zinc finger protein of the cerebellum 4*ENSDARG0000003130738
zic2a / zic family member 2 (odd-paired homolog, Drosophila), a / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000001555436
zic1 / zic family member 1 (odd-paired homolog, Drosophila)ENSDARG0000001556736
zic2b / zic family member 2 (odd-paired homolog, Drosophila) b / ZIC2* / O95409* / Zic family member 2* / zinc finger protein of the cerebellum 2*ENSDARG0000003717835
zic3 / zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) / Q62521* / O60481* / Zic family member 3* / zinc finger protein of the cerebellum 3*ENSDARG0000007149734
gli3 / GLI family zinc finger 3ENSDARG0000005213126
gli2a / GLI family zinc finger 2aENSDARG0000002564125
gli2b / GLI family zinc finger 2b / GLI2* / P10070* / GLI family zinc finger 2*ENSDARG0000002088423
gli1 / GLI family zinc finger 1 / P08151*ENSDARG0000010124422
glis3 / GLIS family zinc finger 3 / Q6XP49* / Q8NEA6* / Zinc finger protein GLIS3 *ENSDARG0000006972620
glis1b / GLIS family zinc finger 1b / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000002793319
glis2a / GLIS family zinc finger 2a / GLIS2* / Q9BZE0* / GLIS family zinc finger 2*ENSDARG0000007838818
glis2b / GLIS family zinc finger 2b / GLIS2* / Q8VDL9* / Q9BZE0* / GLIS family zinc finger 2* / Zinc finger protein GLIS2 *ENSDARG0000010023218
glis1a / GLIS family zinc finger 1a / GLIS1* / Q8K1M4* / Q8NBF1* / GLIS family zinc finger 1* / Zinc finger protein GLIS1 *ENSDARG0000006858017
si:dkey-149i17.7ENSDARG0000009468417


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021510 spinal cord development IMP
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000938 central canal central canal morphology , abnormal
Show

 ZFA:0001177 roof plate spinal cord region roof plate spinal cord region cell projection absent , abnormal
roof plate spinal cord region malformed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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