ENSDARG00000071501


Danio rerio

Features
Gene ID: ENSDARG00000071501
  
Biological name :hs6st1b
  
Synonyms : A0MGZ5 / heparan sulfate 6-O-sulfotransferase 1b / hs6st1b
  
Possible biological names infered from orthology : heparan sulfate 6-O-sulfotransferase 1 / HS6ST1 / O60243 / Q9QYK5
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 27783946
Gene end: 27879182
  
Corresponding Affymetrix probe sets: Dr.25993.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000096556
swissprot - A0MGZ5
ZFIN ID - ZDB-GENE-070103-2
Ensembl - ENSDARG00000071501
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HS6ST1ENSGALG00000002155Gallus gallus
 HS6ST1ENSG00000136720Homo sapiens
 Hs6st1ENSMUSG00000045216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q56UJ5 / hs6st1a / heparan sulfate 6-O-sulfotransferase 1a / HS6ST1* / O60243* / Q9QYK5* / heparan sulfate 6-O-sulfotransferase 1*ENSDARG0000005475484
hs6st3a / heparan sulfate 6-O-sulfotransferase 3aENSDARG0000007121757
hs6st2 / Q800H9 / heparan sulfate 6-O-sulfotransferase 2ENSDARG0000001202555
hs6st3b / heparan sulfate 6-O-sulfotransferase 3b / Q9QYK4* / HS6ST2* / HS6ST3* / Q8IZP7* / Q96MM7* / Q80UW0* / heparan sulfate 6-O-sulfotransferase 3* / heparan sulfate 6-O-sulfotransferase 2*ENSDARG0000006950042


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR010635  Heparan sulphate 6-sulfotransferase/Protein-tyrosine sulfotransferase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015015 heparan sulfate proteoglycan biosynthetic process, enzymatic modification IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0017095 heparan sulfate 6-O-sulfotransferase activity IBA


Pathways (from Reactome)
Pathway description
HS-GAG biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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