ENSDARG00000071586


Danio rerio

Features
Gene ID: ENSDARG00000071586
  
Biological name :tgfbi
  
Synonyms : tgfbi / transforming growth factor, beta-induced
  
Possible biological names infered from orthology : P82198 / Q15582
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 26511041
Gene end: 26536504
  
Corresponding Affymetrix probe sets: Dr.742.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000096711
NCBI entrez gene - 321421     See in Manteia.
RefSeq - NM_182862
RefSeq Peptide - NP_878282
swissprot - Q503K1
ZFIN ID - ZDB-GENE-030131-73
Ensembl - ENSDARG00000071586
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TGFBIENSGALG00000029429Gallus gallus
 TGFBIENSG00000120708Homo sapiens
 TgfbiENSMUSG00000035493Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
postnb / periostin, osteoblast specific factor b / POSTN* / Q15063* / Q62009* / periostin* / periostin, osteoblast specific factor*ENSDARG0000010426744
postna / periostin, osteoblast specific factor a / POSTN* / Q15063* / Q62009* / periostin* / periostin, osteoblast specific factor*ENSDARG0000004380642


Protein motifs (from Interpro)
Interpro ID Name
 IPR000782  FAS1 domain
 IPR011489  EMI domain
 IPR016666  TGF beta-induced protein/periostin
 IPR032954  Transforming growth factor-beta-induced protein ig-h3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030198 extracellular matrix organization IBA
 biological_processGO:0048747 muscle fiber development IMP
 biological_processGO:0071466 cellular response to xenobiotic stimulus IDA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005178 integrin binding IEA
 molecular_functionGO:0005518 collagen binding IEA
 molecular_functionGO:0050840 extracellular matrix binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001056 myotome myotome myofibril detached from myotome myofibril, abnormal
myotome myofibril decreased thickness , abnormal
myotome myofibril undulate , abnormal
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 ZFA:0009117 fast muscle cell fast muscle cell myofibril decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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