ENSDARG00000074056


Danio rerio

Features
Gene ID: ENSDARG00000074056
  
Biological name :kctd1
  
Synonyms : kctd1 / potassium channel tetramerization domain containing 1
  
Possible biological names infered from orthology : BTB/POZ domain-containing protein KCTD1 / Q5M956 / Q719H9
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 18209895
Gene end: 18256959
  
Corresponding Affymetrix probe sets: Dr.15592.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000098598
Ensembl peptide - ENSDARP00000122151
Ensembl peptide - ENSDARP00000157270
NCBI entrez gene - 555637     See in Manteia.
RefSeq - XM_005160473
swissprot - F1QX14
swissprot - Q5SNS9
ZFIN ID - ZDB-GENE-040724-194
Ensembl - ENSDARG00000074056
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KCTD1ENSGALG00000015124Gallus gallus
 KCTD1ENSG00000134504Homo sapiens
 Kctd1ENSMUSG00000036225Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5XJ34 / kctd15a / potassium channel tetramerization domain containing 15a / Q8K0E1* / Q96SI1* / KCTD15* / BTB/POZ domain-containing protein KCTD15 * / potassium channel tetramerization dom...ENSDARG0000004589371
kctd6a / potassium channel tetramerization domain containing 6a / KCTD6* / Q8NC69* / Q8BNL5* / potassium channel tetramerisation domain containing 6* / potassium channel tetramerization dom...ENSDARG0000004309525
kctd6b / Q6DG99 / potassium channel tetramerization domain containing 6b / KCTD6* / Q8NC69* / Q8BNL5* / potassium channel tetramerisation domain containing 6* / potassium channel tetrameriz...ENSDARG0000002370324
kctd16a / potassium channel tetramerization domain containing 16a / Q5DTY9* / KCTD16* / Q68DU8* / BTB/POZ domain-containing protein KCTD16 * / potassium channel tetramerization domain containing 16*ENSDARG0000000464821
kctd12.2 / potassium channel tetramerisation domain containing 12.2 / KCTD12* / Q96CX2* / potassium channel tetramerization domain containing 12*ENSDARG0000005354221
kctd4 / potassium channel tetramerization domain containing 4 / Q8WVF5* / Q9D7X1* / BTB/POZ domain-containing protein KCTD4 *ENSDARG0000006869121
kctd12.1 / potassium channel tetramerisation domain containing 12.1 / KCTD12* / Q96CX2* / potassium channel tetramerization domain containing 12*ENSDARG0000006984321
kctd16b / potassium channel tetramerization domain containing 16b / Q5DTY9* / KCTD16* / Q68DU8* / BTB/POZ domain-containing protein KCTD16 * / potassium channel tetramerization domain containing 16*ENSDARG0000002010220
kctd8 / potassium channel tetramerization domain containing 8 / Q50H33* / Q6ZWB6* / BTB/POZ domain-containing protein KCTD8 *ENSDARG0000006750720
kctd12b / potassium channel tetramerisation domain containing 12bENSDARG0000003750718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR003131  Potassium channel tetramerisation-type BTB domain
 IPR011333  SKP1/BTB/POZ domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051260 protein homooligomerization IEA


Pathways (from Reactome)
Pathway description
Negative regulation of activity of TFAP2 (AP-2) family transcription factors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000059279 tfap2a / transcription factor AP-2 alpha / P05549*  / complex / reaction
 ENSDARG00000040606 tfap2c / transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) / Q61312* / Q92754* / transcription factor AP-2 gamma*  / complex / reaction






 

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