ENSDARG00000074466


Danio rerio

Features
Gene ID: ENSDARG00000074466
  
Biological name :gdpd3a
  
Synonyms : gdpd3a / glycerophosphodiester phosphodiesterase domain containing 3a
  
Possible biological names infered from orthology : GDPD3 / glycerophosphodiester phosphodiesterase domain containing 3 / Lysophospholipase D GDPD3 / Q7L5L3 / Q99LY2
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 26193592
Gene end: 26204867
  
Corresponding Affymetrix probe sets: Dr.10416.1.S1_at (Zebrafish Array)   Dr.10416.2.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094523
NCBI entrez gene - 406482     See in Manteia.
swissprot - Q6P2T3
ZFIN ID - ZDB-GENE-040426-2279
Ensembl - ENSDARG00000074466
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GDPD3ENSG00000102886Homo sapiens
 Gdpd3ENSMUSG00000030703Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gdpd3b / glycerophosphodiester phosphodiesterase domain containing 3b / GDPD3* / Q7L5L3* / Q99LY2* / Lysophospholipase D GDPD3 * / glycerophosphodiester phosphodiesterase domain containing 3*ENSDARG0000000694459
gdpd1 / glycerophosphodiester phosphodiesterase domain containing 1 / Q8N9F7* / Q9CRY7* / Lysophospholipase D GDPD1 *ENSDARG0000001726148


Protein motifs (from Interpro)
Interpro ID Name
 IPR000909  Phosphatidylinositol-specific phospholipase C, X domain
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007420 brain development IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
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 ZFA:0000128 midbrain midbrain shape , abnormal
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 ZFA:0000155 somite somite U-shaped , abnormal
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 ZFA:0001094 whole organism whole organism movement quality , abnormal
whole organism pigmented , abnormal
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 ZFA:0001117 post-vent region post-vent region shape , abnormal
post-vent region decreased length , abnormal
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 ZFA:0009090 pigment cell pigment cell decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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