ENSDARG00000074533


Danio rerio

Features
Gene ID: ENSDARG00000074533
  
Biological name :slc25a38b
  
Synonyms : P0CAT2 / slc25a38b / solute carrier family 25, member 38b
  
Possible biological names infered from orthology : Q91XD8 / Q96DW6 / SLC25A38 / solute carrier family 25 member 38
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 7721292
Gene end: 7735153
  
Corresponding Affymetrix probe sets: Dr.13098.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000126117
Ensembl peptide - ENSDARP00000126121
NCBI entrez gene - 571961     See in Manteia.
swissprot - I3IT65
swissprot - P0CAT2
ZFIN ID - ZDB-GENE-110214-1
Ensembl - ENSDARG00000074533
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC25A38ENSGALG00000041275Gallus gallus
 Q96DW6ENSG00000144659Homo sapiens
 Q91XD8ENSMUSG00000032519Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q08CI8 / slc25a38a / solute carrier family 25, member 38a / Q96DW6* / SLC25A38* / solute carrier family 25 member 38*ENSDARG0000005980576


Protein motifs (from Interpro)
Interpro ID Name
 IPR002067  Mitochondrial carrier protein
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily
 IPR030847  Mitochondrial glycine transporter Hem25/SLC25A38


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0020027 hemoglobin metabolic process IGI
 biological_processGO:0030218 erythrocyte differentiation IMP
 biological_processGO:0042541 hemoglobin biosynthetic process IGI
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:1904983 glycine import into mitochondrion IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015187 glycine transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte hemoglobin complex decreased amount , abnormal
nucleate erythrocyte increased size , abnormal
nucleate erythrocyte nucleus decondensed , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr