ENSDARG00000074677


Danio rerio

Features
Gene ID: ENSDARG00000074677
  
Biological name :frem3
  
Synonyms : Fras1 related extracellular matrix 3 / frem3
  
Possible biological names infered from orthology : P0C091
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 35614089
Gene end: 35653560
  
Corresponding Affymetrix probe sets: Dr.3300.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123199
swissprot - F1QE56
ZFIN ID - ZDB-GENE-030131-9788
Ensembl - ENSDARG00000074677
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FREM3ENSG00000183090Homo sapiens
 Frem3ENSMUSG00000042353Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
frem2b / Fras1 related extracellular matrix protein 2b / FREM2* / Q5SZK8* / Q6NVD0* / FRAS1 related extracellular matrix protein 2*ENSDARG0000010262670
frem2a / Fras1 related extracellular matrix protein 2a / FREM2* / Q5SZK8* / Q6NVD0* / FRAS1 related extracellular matrix protein 2*ENSDARG0000007685669
fras1 / Fraser extracellular matrix complex subunit 1 / Q80T14* / Q86XX4* / Extracellular matrix protein FRAS1 *ENSDARG0000005461931
frem1b / Fras1 related extracellular matrix 1bENSDARG0000006240221
frem1a / Fras1 related extracellular matrix 1a / FREM1* / Q5H8C1* / FRAS1 related extracellular matrix 1*ENSDARG0000006947320
si:dkey-193c22.2 / BC067074* / cDNA sequence BC067074*ENSDARG0000007673513
cspg4 / chondroitin sulfate proteoglycan 4 / Q6UVK1* / Q8VHY0*ENSDARG0000007822713
si:dkeyp-41f9.3 / BC067074* / cDNA sequence BC067074*ENSDARG000000756006


Protein motifs (from Interpro)
Interpro ID Name
 IPR003644  Na-Ca exchanger/integrin-beta4
 IPR032833  FRAS1-related extracellular matrix protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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