ENSDARG00000074804


Danio rerio

Features
Gene ID: ENSDARG00000074804
  
Biological name :atxn7
  
Synonyms : ataxin 7 / atxn7
  
Possible biological names infered from orthology : O15265 / Q8R4I1
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 19511642
Gene end: 19598809
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000097837
Ensembl peptide - ENSDARP00000139234
Ensembl peptide - ENSDARP00000131743
NCBI entrez gene - 100001490     See in Manteia.
RefSeq - XM_009305965
swissprot - E7F640
swissprot - A0A0R4IWD7
ZFIN ID - ZDB-GENE-110621-1
Ensembl - ENSDARG00000074804
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000007302Gallus gallus
 ATXN7ENSG00000163635Homo sapiens
 ATXN7ENSG00000285258Homo sapiens
 Atxn7ENSMUSG00000021738Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atxn7l2a / ataxin 7-like 2a / Q5T6C5* / ATXN7L2* / ataxin 7 like 2*ENSDARG0000005530021
atxn7l2b / ataxin 7-like 2b / Q5T6C5* / ATXN7L2* / ataxin 7 like 2*ENSDARG0000005626818
atxn7l1 / ataxin 7-like 1 / Q9CZ05* / Q9ULK2* / Ataxin-7-like protein 1 *ENSDARG0000008986014


Protein motifs (from Interpro)
Interpro ID Name
 IPR013243  SCA7 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021702 cerebellar Purkinje cell differentiation IMP
 biological_processGO:0021707 cerebellar granule cell differentiation IMP
 biological_processGO:0043009 chordate embryonic development IMP
 biological_processGO:0046530 photoreceptor cell differentiation IMP


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000143 retinal photoreceptor layer retinal photoreceptor layer disorganized , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
whole organism deformed , abnormal
Show

 ZFA:0001691 cerebellar granule cell cerebellar granule cell decreased amount , abnormal
Show

 ZFA:0009071 Purkinje cell Purkinje cell decreased amount , abnormal
Show

 ZFA:0009127 photoreceptor cell photoreceptor cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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