ENSDARG00000074909


Danio rerio
culmembranedcaf17wdyvtnrepeat-like-containingdomainsuperfamilyddb--associatedfactorproteinubiquitinationnucleusnucleolusintegralcomponent-ringeubiquitinligasecomplexneddylation

Features
Gene ID: ENSDARG00000074909
  
Biological name :dcaf17
  
Synonyms : A8WHR0 / dcaf17 / ddb1 and cul4 associated factor 17
  
Possible biological names infered from orthology : Q3TUL7 / Q5H9S7
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 3498377
Gene end: 3519717
  
Corresponding Affymetrix probe sets: Dr.16587.1.A1_at (Zebrafish Array)   Dr.23516.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118384
Ensembl peptide - ENSDARP00000139615
Ensembl peptide - ENSDARP00000121682
NCBI entrez gene - 558828     See in Manteia.
RefSeq - NM_001144789
RefSeq Peptide - NP_001138261
swissprot - E9QJA1
swissprot - A8WHR0
swissprot - A0A0R4IWT1
ZFIN ID - ZDB-GENE-071008-1
Ensembl - ENSDARG00000074909
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DCAF17ENSGALG00000037327Gallus gallus
 DCAF17ENSG00000115827Homo sapiens
 Dcaf17ENSMUSG00000041966Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR031620  DDB1- and CUL4-associated factor 17


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processnitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic processorganic substance metabolic process
cellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellorganellemembrane-enclosed lumenmembraneprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenmembranemembraneprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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