ENSDARG00000075785


Danio rerio

Features
Gene ID: ENSDARG00000075785
  
Biological name :HERC5
  
Synonyms : HERC5 / si:ch73-190m4.1
  
Possible biological names infered from orthology : AC098582.1 / E3 ISG15--protein ligase Herc6 / F2Z461 / HECT and RLD domain containing E3 ubiquitin protein ligase 5 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 / HERC6 / Q8IVU3 / Q9UII4
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 50613868
Gene end: 50637221
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099456
swissprot - F1RDE7
ZFIN ID - ZDB-GENE-090311-56
Ensembl - ENSDARG00000075785
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC098582.1ENSG00000285385Homo sapiens
 HERC5ENSG00000138646Homo sapiens
 HERC6ENSG00000138642Homo sapiens
 Herc6ENSMUSG00000029798Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-281g13.5ENSDARG0000007405244
slc47a2.2 / solute carrier family 47 (multidrug and toxin extrusion), member 2.2ENSDARG0000007413644
si:ch211-281g13.4ENSDARG0000007538943
herc4 / HECT and RLD domain containing E3 ubiquitin protein ligase 4 / Q5GLZ8*ENSDARG0000005993634
herc3 / HECT and RLD domain containing E3 ubiquitin protein ligase 3 / Q15034*ENSDARG0000007588732
herc1 / HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 / Q15751*ENSDARG0000007790117
ube3a / ubiquitin protein ligase E3A / O08759* / Q05086*ENSDARG0000005573716
herc2 / HECT and RLD domain containing E3 ubiquitin protein ligase 2 / O95714* / Q4U2R1* / E3 ubiquitin-protein ligase HERC2 *ENSDARG0000007384116
hectd2 / HECT domain containing 2 / Q5U5R9* / Q8CDU6* / HECT domain E3 ubiquitin protein ligase 2* / Probable E3 ubiquitin-protein ligase HECTD2 *ENSDARG0000006119414
hectd3 / HECT domain containing 3 / Q3U487* / Q5T447* / E3 ubiquitin-protein ligase HECTD3 * / HECT domain E3 ubiquitin protein ligase 3*ENSDARG0000003890511
rccd1 / RCC1 domain containing 1ENSDARG000000710746
herc7 / hect domain and RLD 7ENSDARG000000989060


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR000569  HECT domain
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
ISG15 antiviral mechanism
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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