ENSDARG00000075826


Danio rerio

Features
Gene ID: ENSDARG00000075826
  
Biological name :msh4
  
Synonyms : msh4 / mutS homolog 4
  
Possible biological names infered from orthology : MutS protein homolog 4 / O15457 / Q99MT2
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 43889371
Gene end: 43920385
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000155875
Ensembl peptide - ENSDARP00000104178
Ensembl peptide - ENSDARP00000127531
Ensembl peptide - ENSDARP00000128074
Ensembl peptide - ENSDARP00000145380
swissprot - E7F2H3
swissprot - X1WBE0
swissprot - X1WCX7
ZFIN ID - ZDB-GENE-131121-643
Ensembl - ENSDARG00000075826
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MSH4ENSGALG00000011392Gallus gallus
 MSH4ENSG00000057468Homo sapiens
 Msh4ENSMUSG00000005493Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000432  DNA mismatch repair protein MutS, C-terminal
 IPR007696  DNA mismatch repair protein MutS, core
 IPR007860  DNA mismatch repair protein MutS, connector domain
 IPR007861  DNA mismatch repair protein MutS, clamp
 IPR011184  DNA mismatch repair Msh2-type
 IPR017261  DNA mismatch repair protein MutS/MSH
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006298 mismatch repair IEA
 biological_processGO:0051026 chiasma assembly IBA
 cellular_componentGO:0000795 synaptonemal complex IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008094 DNA-dependent ATPase activity IBA
 molecular_functionGO:0030983 mismatched DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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