ENSDARG00000075833


Danio rerio

Features
Gene ID: ENSDARG00000075833
  
Biological name :lyve1a
  
Synonyms : lymphatic vessel endothelial hyaluronic receptor 1a / lyve1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 66822229
Gene end: 66833588
  
Corresponding Affymetrix probe sets: Dr.1445.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000104347
NCBI entrez gene - 560618     See in Manteia.
swissprot - F1R2G7
ZFIN ID - ZDB-GENE-031118-138
Ensembl - ENSDARG00000075833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lyve1b / lymphatic vessel endothelial hyaluronic receptor 1b / LYVE1* / Q8BHC0* / Q9Y5Y7* / lymphatic vessel endothelial hyaluronan receptor 1* / Lymphatic vessel endothelial hyaluronic aci...ENSDARG0000006248322
cd44b / CD44 molecule (Indian blood group) b / CD44* / P16070* / CD44 molecule (Indian blood group)*ENSDARG0000008989215
cd44a / CD44 molecule (Indian blood group) a / CD44* / P16070* / CD44 molecule (Indian blood group)*ENSDARG0000008786314


Protein motifs (from Interpro)
Interpro ID Name
 IPR000538  Link domain
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism dead , abnormal
Show

 ZFA:0001117 post-vent region post-vent region bent , abnormal
Show

 ZFA:0005110 thoracic duct thoracic duct agenesis , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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