ENSDARG00000075960


Danio rerio
membranecdh24acadherinadhesiondomainbindingcellplasmacytoplasmiccadherin-likeconservedsitecateninsuperfamilyhomophilicviamoleculesintegralcomponentcalciumion

Features
Gene ID: ENSDARG00000075960
  
Biological name :cdh24a
  
Synonyms : cadherin 24, type 2a / cdh24a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 40604951
Gene end: 40744851
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102632
Ensembl peptide - ENSDARP00000118834
swissprot - E7F374
swissprot - F1Q9S5
ZFIN ID - ZDB-GENE-090312-96
Ensembl - ENSDARG00000075960
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh5 / cadherin 5 / P33151* / P55284*ENSDARG0000007554919


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
cell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesioncell adhesion
ion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion bindingion binding
cellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellmembranecellcellmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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