ENSDARG00000076779


Danio rerio

Features
Gene ID: ENSDARG00000076779
  
Biological name :fam13b
  
Synonyms : fam13b / family with sequence similarity 13, member B
  
Possible biological names infered from orthology : Protein FAM13B / Q8K2H3 / Q9NYF5
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 24316770
Gene end: 24391485
  
Corresponding Affymetrix probe sets: Dr.6589.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000102677
Ensembl peptide - ENSDARP00000142469
Ensembl peptide - ENSDARP00000142137
Ensembl peptide - ENSDARP00000105416
NCBI entrez gene - 568603     See in Manteia.
RefSeq - NM_001328042
RefSeq - XM_005173130
RefSeq Peptide - NP_001314971
swissprot - F1QI23
swissprot - E7FEF1
swissprot - A0A140LGU0
swissprot - A0A140LFW1
ZFIN ID - ZDB-GENE-030131-4913
Ensembl - ENSDARG00000076779
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAM13BENSGALG00000041706Gallus gallus
 FAM13BENSG00000031003Homo sapiens
 Fam13bENSMUSG00000036501Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-68l7.2ENSDARG0000009464411
si:dkeyp-85h7.1ENSDARG0000009826011
si:dkey-219e20.2ENSDARG0000009422410
CABZ01031870.1 / FAM13A* / O94988* / family with sequence similarity 13 member A*ENSDARG0000011673210
si:ch1073-272j17.3ENSDARG000000933679
si:dkey-201k7.1ENSDARG000000943899
fam13a / family with sequence similarity 13, member A / O94988*ENSDARG000000755648
si:dkey-102f14.7ENSDARG000000922555


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR008936  Rho GTPase activation protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr