ENSDARG00000076966


Danio rerio

Features
Gene ID: ENSDARG00000076966
  
Biological name :pagr1
  
Synonyms : pagr1 / PAXIP1 associated glutamate-rich protein 1
  
Possible biological names infered from orthology : AC120114.5 / Gm42742 / Pagr1a / Pagr1b / PAXIP1-associated glutamate-rich protein 1A / Q99L02 / Q9BTK6
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 3723650
Gene end: 3732014
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145086
Ensembl peptide - ENSDARP00000104234
Ensembl peptide - ENSDARP00000126936
NCBI entrez gene - 326076     See in Manteia.
RefSeq - NM_001326689
RefSeq - NM_001326690
RefSeq Peptide - NP_001313618
RefSeq Peptide - NP_001313619
swissprot - E7F1D2
ZFIN ID - ZDB-GENE-030131-4801
Ensembl - ENSDARG00000076966
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC120114.5ENSG00000281348Homo sapiens
 PAGR1ENSG00000280789Homo sapiens
 Pagr1aENSMUSG00000030680Mus musculus
 Pagr1bENSMUSG00000092534Mus musculus
 Q99L02ENSMUSG00000107068Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR028213  PTIP-associated protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
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 ZFA:0001117 post-vent region post-vent region shape , abnormal
post-vent region decreased length , abnormal
Show

 ZFA:0001261 ventricular system ventricular system decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr