ENSDARG00000076974


Danio rerio

Features
Gene ID: ENSDARG00000076974
  
Biological name :pdzd7a
  
Synonyms : pdzd7a / PDZ domain containing 7a
  
Possible biological names infered from orthology : PDZD7 / PDZ domain containing 7 / Q9H5P4
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 18701906
Gene end: 18783485
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118378
Ensembl peptide - ENSDARP00000139792
NCBI entrez gene - 100332580     See in Manteia.
RefSeq - NM_001190757
RefSeq Peptide - NP_001177686
swissprot - F1QLV2
swissprot - A0A0R4IUM9
ZFIN ID - ZDB-GENE-090313-191
Ensembl - ENSDARG00000076974
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDZD7ENSGALG00000020726Gallus gallus
 PDZD7ENSG00000186862Homo sapiens
 Pdzd7ENSMUSG00000074818Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
whrna / whirlin aENSDARG0000007536219
whrnb / whirlin b / WHRN* / Q80VW5* / Q9P202* / whirlin*ENSDARG0000006816618
ush1c / Usher syndrome 1C / Q9Y6N9* / USH1 protein network component harmonin*ENSDARG0000005187612
pdzd11 / Q6NXB2 / PDZ domain containing 11 / Q9CZG9* / Q5EBL8* / PDZ domain-containing protein 11 *ENSDARG000000531945


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042462 eye photoreceptor cell development IMP
 biological_processGO:0060119 inner ear receptor cell development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000619 anterior crista anterior crista stereocilium bundle malformed , abnormal
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 ZFA:0009154 eye photoreceptor cell eye photoreceptor cell apoptotic , abnormal
eye photoreceptor cell photoreceptor connecting cilium physical object quality , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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