ENSDARG00000077523


Danio rerio

Features
Gene ID: ENSDARG00000077523
  
Biological name :tdrd7b
  
Synonyms : E7FDW8 / tdrd7b / tudor domain containing 7 b
  
Possible biological names infered from orthology : Mus musculus tudor domain containing 7 (Tdrd7), transcript variant 3, mRNA. / Q8K1H1 / Q8NHU6 / TDRD7 / tudor domain containing 7
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 61906903
Gene end: 61962466
  
Corresponding Affymetrix probe sets: Dr.26420.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000101927
NCBI entrez gene - 100004703     See in Manteia.
RefSeq - NM_001353929
RefSeq Peptide - NP_001340858
swissprot - E7FDW8
ZFIN ID - ZDB-GENE-150109-14
Ensembl - ENSDARG00000077523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TDRD7ENSGALG00000012350Gallus gallus
 TDRD7ENSG00000196116Homo sapiens
 Tdrd7ENSMUSG00000035517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tdrd7a / tudor domain containing 7 a / TDRD7* / Q8NHU6* / Q8K1H1* / tudor domain containing 7* / Mus musculus tudor domain containing 7 (Tdrd7), transcript variant 3, mRNA.*ENSDARG0000003280847


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR025605  OST-HTH/LOTUS domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002089 lens morphogenesis in camera-type eye ISS
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0010608 posttranscriptional regulation of gene expression ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0070306 lens fiber cell differentiation ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0035770 ribonucleoprotein granule ISS
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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