ENSDARG00000077643


Danio rerio

Features
Gene ID: ENSDARG00000077643
  
Biological name :lypd6b
  
Synonyms : LY6/PLAUR domain containing 6B / lypd6b
  
Possible biological names infered from orthology : Ly6/PLAUR domain-containing protein 6B / Q8NI32 / Q9D7F2
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 23142170
Gene end: 23181062
  
Corresponding Affymetrix probe sets: Dr.21962.1.A1_at (Zebrafish Array)   Dr.6517.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000154731
Ensembl peptide - ENSDARP00000154879
Ensembl peptide - ENSDARP00000116435
Ensembl peptide - ENSDARP00000138831
Ensembl peptide - ENSDARP00000145147
Ensembl peptide - ENSDARP00000150105
NCBI entrez gene - 554606     See in Manteia.
RefSeq - NM_001128329
RefSeq Peptide - NP_001121801
swissprot - B0S8J0
swissprot - F1R757
ZFIN ID - ZDB-GENE-050522-38
Ensembl - ENSDARG00000077643
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYPD6BENSGALG00000028759Gallus gallus
 LYPD6BENSG00000150556Homo sapiens
 Lypd6bENSMUSG00000026765Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lypd6 / Q66IA6 / LY6/PLAUR domain containing 6 / Q86Y78* / Q8BPP5* / Ly6/PLAUR domain-containing protein 6 *ENSDARG0000000430728


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000217 inner ear inner ear lacks all parts of type otolith , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr