ENSDARG00000078041


Danio rerio

Features
Gene ID: ENSDARG00000078041
  
Biological name :xpo1a
  
Synonyms : exportin 1 (CRM1 homolog, yeast) a / xpo1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 53657337
Gene end: 53685090
  
Corresponding Affymetrix probe sets: Dr.12499.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000102922
Ensembl peptide - ENSDARP00000130597
NCBI entrez gene - 558395     See in Manteia.
swissprot - A0A0R4IA10
swissprot - E7F0E8
ZFIN ID - ZDB-GENE-050309-201
Ensembl - ENSDARG00000078041
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
xpo1b / exportin 1 (CRM1 homolog, yeast) b / XPO1* / O14980* / Q6P5F9* / exportin 1*ENSDARG0000006322995


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR013598  Exportin-1/Importin-beta-like
 IPR014877  CRM1 C-terminal domain
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000055 ribosomal large subunit export from nucleus IBA
 biological_processGO:0000056 ribosomal small subunit export from nucleus IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0046825 regulation of protein export from nucleus IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005049 nuclear export signal receptor activity IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head morphology , abnormal
Show

 ZFA:0001115 trunk trunk morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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