ENSDARG00000078180


Danio rerio

Features
Gene ID: ENSDARG00000078180
  
Biological name :sc:d0202
  
Synonyms : sc:d0202
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 46425262
Gene end: 46427696
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128970
NCBI entrez gene - 569842     See in Manteia.
RefSeq - NM_001098252
RefSeq Peptide - NP_001091722
swissprot - F1QHY0
ZFIN ID - ZDB-GENE-080226-9
Ensembl - ENSDARG00000078180
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-66e2.3ENSDARG0000007882482
sc:d0202 / si:ch211-74m13.1ENSDARG0000009531271
si:ch211-74m13.3ENSDARG0000007614456
si:ch73-208g10.1ENSDARG0000007980854
si:ch211-66e2.5ENSDARG0000009157945
si:ch211-74m13.1ENSDARG0000009495210


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR003987  Intercellular adhesion molecule/vascular cell adhesion molecule, N-terminal
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013768  Intercellular adhesion molecule, N-terminal
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005178 integrin binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr