ENSDARG00000078206


Danio rerio

Features
Gene ID: ENSDARG00000078206
  
Biological name :zgc:171506
  
Synonyms : zgc:171506
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 24612191
Gene end: 24627802
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101766
Ensembl peptide - ENSDARP00000152635
NCBI entrez gene - 792896     See in Manteia.
RefSeq - NM_001114448
RefSeq - NM_001327812
RefSeq Peptide - NP_001107920
RefSeq Peptide - NP_001314741
swissprot - F1QTI0
ZFIN ID - ZDB-GENE-080204-96
Ensembl - ENSDARG00000078206
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-68o6.5ENSDARG0000009924736
si:dkey-68o6.6ENSDARG0000010435023


Protein motifs (from Interpro)
Interpro ID Name
 IPR000770  SAND domain
 IPR010919  SAND-like domain superfamily
 IPR024830  Glucocorticoid modulatory element-binding protein 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr