ENSDARG00000078246


Danio rerio

Features
Gene ID: ENSDARG00000078246
  
Biological name :si:ch211-114l13.4
  
Synonyms : si:ch211-114l13.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 58066109
Gene end: 58076716
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127840
Ensembl peptide - ENSDARP00000103447
NCBI entrez gene - 796740     See in Manteia.
RefSeq - XM_009295711
swissprot - X1WC97
swissprot - A0A0A0MPM8
ZFIN ID - ZDB-GENE-070424-113
Ensembl - ENSDARG00000078246
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-15j1.3ENSDARG0000009207087
si:dkey-222h21.1ENSDARG0000009250083
si:ch211-194e1.7 / si:ch211-194e1.9ENSDARG0000006812771
trpm2 / si:ch211-203c5.3 / transient receptor potential cation channel, subfamily M, member 2ENSDARG0000009569652
si:ch211-133h13.1ENSDARG0000011691552
si:dkey-16p6.4ENSDARG0000006816151
si:dkey-84h14.1ENSDARG0000008729351
si:dkey-240n22.3ENSDARG0000009501351
si:dkey-28i19.3ENSDARG0000009817751
si:dkey-165o8.1ENSDARG0000009836951
si:dkey-151g22.1ENSDARG0000009845251
si:dkey-8o9.2 / si:dkey-190j3.6 / si:dkey-84h14.2 / si:ch211-207e19.2ENSDARG0000009861051
si:dkey-4j21.2 / si:dkey-261o4.6ENSDARG0000009887951
si:ch211-227p7.5ENSDARG0000009904651
si:dkey-27n6.1 / si:ch211-196h24.1ENSDARG0000009938151
si:ch211-246b8.1ENSDARG0000009943251
si:ch211-196h24.2ENSDARG0000010034151
si:dkey-71l4.1 / si:ch211-232d10.2ENSDARG0000010034851
zgc:174180ENSDARG0000010138951
si:ch211-215p11.3ENSDARG0000010145051


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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