ENSDARG00000078592


Danio rerio
regulationnomofolddomainunknownfunctiondufsignaltransductionnodalsignalingpathwayinvolveddeterminationlateralmesodermleftrightasymmetryendoplasmicreticulummembranecarbohydratebinding

Features
Gene ID: ENSDARG00000078592
  
Biological name :nomo
  
Synonyms : nodal modulator / nomo
  
Possible biological names infered from orthology : NODAL modulator 1 / NODAL modulator 2 / NODAL modulator 3 / NOMO1 / NOMO2 / NOMO3 / P69849 / Q15155 / Q5JPE7 / Q6GQT9
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 16673793
Gene end: 16717878
  
Corresponding Affymetrix probe sets: Dr.18213.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000128647
NCBI entrez gene - 446115     See in Manteia.
RefSeq - XM_002662315
swissprot - X1WEJ6
ZFIN ID - ZDB-GENE-040826-3
Ensembl - ENSDARG00000078592
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000029360Gallus gallus
 NOMO1ENSG00000103512Homo sapiens
 NOMO2ENSG00000185164Homo sapiens
 NOMO3ENSG00000103226Homo sapiens
 Nomo1ENSMUSG00000030835Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013784  Carbohydrate-binding-like fold
 IPR019008  Domain of unknown function DUF2012


Gene Ontology (GO)
cell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentcell communicatiocell communicationcellular responsecellular response to stimulusnitrogen compoundnitrogen compound metabolic processbiosynthetic procbiosynthetic processcellular metabolicellular metabolic processprimary metabolicprimary metabolic processorganic substanceorganic substance metabolic processanatomical structanatomical structure development
carbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate bindingcarbohydrate binding
cellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellcellmembranemembraneorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0009966 regulation of signal transduction IMP
 biological_processGO:1900176 negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry IMP
 cellular_componentGO:0005789 endoplasmic reticulum membrane IDA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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