ENSDARG00000078613


Danio rerio

Features
Gene ID: ENSDARG00000078613
  
Biological name :vhll
  
Synonyms : vhll / von Hippel-Lindau tumor suppressor like
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 12966640
Gene end: 12968021
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000099149
NCBI entrez gene - 795635     See in Manteia.
RefSeq - NM_001128792
RefSeq Peptide - NP_001122264
swissprot - B3DHE4
ZFIN ID - ZDB-GENE-081022-78
Ensembl - ENSDARG00000078613
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vhl / von Hippel-Lindau tumor suppressor / VHLL* / P40338* / Q6RSH7* / P40337* / VHL like*ENSDARG0000007061730


Protein motifs (from Interpro)
Interpro ID Name
 IPR002714  von Hippel-Lindau tumour suppressor protein
 IPR022772  von Hippel-Lindau disease tumour suppressor, beta/alpha domain
 IPR024048  von Hippel-Lindau disease tumour suppressor, alpha domain
 IPR024053  von Hippel-Lindau disease tumour suppressor, beta domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0030891 VCB complex IBA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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