ENSDARG00000078733


Danio rerio

Features
Gene ID: ENSDARG00000078733
  
Biological name :cnnm2b
  
Synonyms : cnnm2b / cyclin and CBS domain divalent metal cation transport mediator 2b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 31725154
Gene end: 31799359
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000098293
Ensembl peptide - ENSDARP00000155236
NCBI entrez gene - 565702     See in Manteia.
swissprot - F1QIW8
ZFIN ID - ZDB-GENE-090311-26
Ensembl - ENSDARG00000078733
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnnm2a / cyclin and CBS domain divalent metal cation transport mediator 2aENSDARG0000006119581
cnnm4b / cyclin and CBS domain divalent metal cation transport mediator 4bENSDARG0000007430960
CNNM1 / Danio rerio cyclin and CBS domain divalent metal cation transport mediator 1 (cnnm1), mRNA. / Q9NRU3* / cyclin and CBS domain divalent metal cation transport mediator 1*ENSDARG0000007808751
cnnm4a / cyclin and CBS domain divalent metal cation transport mediator 4a / CNNM2* / Q9H8M5* / cyclin and CBS domain divalent metal cation transport mediator 2*ENSDARG0000010238037
si:ch211-230g14.6ENSDARG000001037378


Protein motifs (from Interpro)
Interpro ID Name
 IPR000644  CBS domain
 IPR002550  CNNM, transmembrane domain
 IPR014710  RmlC-like jelly roll fold
 IPR018490  Cyclic nucleotide-binding-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IMP
 biological_processGO:0010960 magnesium ion homeostasis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary malformed , abnormal
Show

 ZFA:0000054 pericardium pericardium distended , abnormal
Show

 ZFA:0000079 telencephalon telencephalon hydrocephalic , abnormal
Show

 ZFA:0000151 pronephros pronephros cystic , abnormal
Show

 ZFA:0000445 optic tectum optic tectum increased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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