ENSDARG00000078854


Danio rerio

Features
Gene ID: ENSDARG00000078854
  
Biological name :tusc3
  
Synonyms : tumor suppressor candidate 3 / tusc3
  
Possible biological names infered from orthology : Q13454 / Q8BTV1
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 16073887
Gene end: 16220235
  
Corresponding Affymetrix probe sets: Dr.12544.1.A1_at (Zebrafish Array)   NM_001020560_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000110152
Ensembl peptide - ENSDARP00000137399
Ensembl peptide - ENSDARP00000054706
NCBI entrez gene - 553582     See in Manteia.
RefSeq - XM_021474885
RefSeq - NM_001020560
RefSeq Peptide - NP_001018396
swissprot - F1RET6
swissprot - A0A0R4ISV3
swissprot - E7FCL8
swissprot - Q503W5
ZFIN ID - ZDB-GENE-050522-381
Ensembl - ENSDARG00000078854
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TUSC3ENSGALG00000013674Gallus gallus
 TUSC3ENSG00000104723Homo sapiens
 Tusc3ENSMUSG00000039530Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
magt1 / Q7ZV50 / magnesium transporter 1 / Q9H0U3*ENSDARG0000005806273


Protein motifs (from Interpro)
Interpro ID Name
 IPR012336  Thioredoxin-like fold
 IPR021149  Oligosaccharyl transferase complex, subunit OST3/OST6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015693 magnesium ion transport IGI
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 cellular_componentGO:0008250 oligosaccharyltransferase complex IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IBA


Pathways (from Reactome)
Pathway description
Miscellaneous transport and binding events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001114 head head decreased size , abnormal
head malformed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr