ENSDARG00000078916


Danio rerio

Features
Gene ID: ENSDARG00000078916
  
Biological name :chrdl2
  
Synonyms : chordin-like 2 / chrdl2
  
Possible biological names infered from orthology : Q6WN34
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 21771814
Gene end: 21781158
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100035
NCBI entrez gene - 563085     See in Manteia.
RefSeq - NM_001130959
RefSeq Peptide - NP_001124431
swissprot - B4XEZ3
ZFIN ID - ZDB-GENE-081104-305
Ensembl - ENSDARG00000078916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHRDL2ENSGALG00000017308Gallus gallus
 CHRDL2ENSG00000054938Homo sapiens
 Chrdl2ENSMUSG00000030732Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chrd / chordin / Q9H2X0* / Q9Z0E2* / Mus musculus chordin (Chrd), transcript variant 3, mRNA.*ENSDARG0000000611019


Protein motifs (from Interpro)
Interpro ID Name
 IPR001007  VWFC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009953 dorsal/ventral pattern formation IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000084 yolk yolk increased size , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0001094 whole organism whole organism wholly ventralized , abnormal
whole organism broken , abnormal
whole organism decreased length , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curved , abnormal
post-vent region bent , abnormal
post-vent region truncated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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