ENSDARG00000079884


Danio rerio

Features
Gene ID: ENSDARG00000079884
  
Biological name :trim107
  
Synonyms : trim107 / tripartite motif containing 107
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 1553442
Gene end: 1566581
  
Corresponding Affymetrix probe sets: Dr.12988.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000149545
Ensembl peptide - ENSDARP00000099771
Ensembl peptide - ENSDARP00000128240
NCBI entrez gene - 100329882     See in Manteia.
swissprot - F1R358
swissprot - X1WDE1
ZFIN ID - ZDB-GENE-110919-5
Ensembl - ENSDARG00000079884
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FQ377660.1ENSDARG0000011163719


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr