ENSDARG00000081270


Danio rerio

Features
Gene ID: ENSDARG00000081270
  
Biological name :rn7sk
  
Synonyms : rn7sk / RNA, 7SK small nuclear
  
Possible biological names infered from orthology : Gm22025 / Gm22257 / Gm23037 / Gm23409 / Gm24441 / Gm25435 / Gm25782 / Gm25838 / predicted gene, 22025 / predicted gene, 22257 / predicted gene, 23037 / predicted gene, 23409 / predicted gene, 24441 / predicted gene, 25435 / predicted gene, 25782 / predicted gene, 25838 / RN7SKP118 / RN7SKP156 / RN7SKP160 / RN7SKP175 / RN7SKP185 / RN7SKP19 / RN7SKP267 / RN7SKP284 / RN7SKP293 / RN7SKP295 / RN7SKP56 / RN7SKP62 / RN7SKP76 / RN7SKP80 / RNA, 7SK, nuclear / RNA, 7SK small nuclear pseudogene 118 / RNA, 7SK small nuclear pseudogene 156 / RNA, 7SK small nuclear pseudogene 160 / RNA, 7SK small nuclear pseudogene 175 / RNA, 7SK small nuclear pseudogene 185 / RNA, 7SK small nuclear pseudogene 19 / RNA, 7SK small nuclear pseudogene 267 / RNA, 7SK small nuclear pseudogene 284 / RNA, 7SK small nuclear pseudogene 293 / RNA, 7SK small nuclear pseudogene 295 / RNA, 7SK small nuclear pseudogene 56 / RNA, 7SK small nuclear pseudogene 62 / RNA, 7SK small nuclear pseudogene 76 / RNA, 7SK small nuclear pseudogene 80
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 825904
Gene end: 826225
  
Corresponding Affymetrix probe sets:
  
Cross references: NCBI entrez gene - 100272168     See in Manteia.
ZFIN ID - ZDB-GENE-090323-1
Ensembl - ENSDARG00000081270
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RF00100ENSGALG00000024676Gallus gallus
 RN7SKP118ENSG00000201201Homo sapiens
 RN7SKP156ENSG00000222240Homo sapiens
 RN7SKP160ENSG00000200674Homo sapiens
 RN7SKP175ENSG00000275558Homo sapiens
 RN7SKP185ENSG00000199683Homo sapiens
 RN7SKP19ENSG00000251825Homo sapiens
 RN7SKP267ENSG00000222313Homo sapiens
 RN7SKP284ENSG00000222934Homo sapiens
 RN7SKP293ENSG00000223321Homo sapiens
 RN7SKP295ENSG00000253073Homo sapiens
 RN7SKP56ENSG00000222445Homo sapiens
 RN7SKP62ENSG00000207269Homo sapiens
 RN7SKP76ENSG00000201289Homo sapiens
 RN7SKP80ENSG00000202058Homo sapiens
 Gm22025ENSMUSG00000084683Mus musculus
 Gm22257ENSMUSG00000089312Mus musculus
 Gm23037ENSMUSG00000065808Mus musculus
 Gm23409ENSMUSG00000089141Mus musculus
 Gm24441ENSMUSG00000087860Mus musculus
 Gm25435ENSMUSG00000088902Mus musculus
 Gm25782ENSMUSG00000084475Mus musculus
 Gm25838ENSMUSG00000089545Mus musculus
 Rn7skENSMUSG00000065037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00100 / RN7SKP64* / RN7SKP12* / RN7SKP58* / RN7SKP59* / RN7SKP283* / RN7SKP218* / RN7SKP252* / RN7SKP256* / RNA, 7SK small nuclear pseudogene 12* / RNA, 7SK small nuclear pseudogene 59* /...ENSDARG0000008367525


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match