ENSDARG00000087206


Danio rerio

Features
Gene ID: ENSDARG00000087206
  
Biological name :cct2
  
Synonyms : cct2 / chaperonin containing TCP1, subunit 2 (beta)
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 78008298
Gene end: 78009682
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000143083
swissprot - A0A1L1QZG0
ZFIN ID - ZDB-GENE-020419-6
Ensembl - ENSDARG00000087206
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CCT2 / chaperonin containing TCP1 subunit 2 / P78371*ENSDARG000001046740


Protein motifs (from Interpro)
Interpro ID Name
 IPR002194  Chaperonin TCP-1, conserved site
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR012716  T-complex protein 1, beta subunit
 IPR017998  Chaperone tailless complex polypeptide 1 (TCP-1)
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0032402 melanosome transport IMP
 biological_processGO:0070121 Kupffer"s vesicle development IMP
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0051082 unfolded protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle decreased size , abnormal
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 ZFA:0000008 brain brain morphology , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
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 ZFA:0000114 heart heart edematous , abnormal
heart quality , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head necrotic , abnormal
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 ZFA:0001115 trunk trunk necrotic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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