ENSDARG00000087752


Danio rerio

Features
Gene ID: ENSDARG00000087752
  
Biological name :rfwd3
  
Synonyms : rfwd3 / ring finger and WD repeat domain 3
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RFWD3 / Q6PCD5 / Q8CIK8
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 37249963
Gene end: 37262282
  
Corresponding Affymetrix probe sets: Dr.6074.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000127754
Ensembl peptide - ENSDARP00000128473
Ensembl peptide - ENSDARP00000112439
NCBI entrez gene - 100329327     See in Manteia.
RefSeq - XM_002666962
swissprot - E7FGP7
swissprot - X1WC12
swissprot - X1WE22
ZFIN ID - ZDB-GENE-120529-1
Ensembl - ENSDARG00000087752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000002755Gallus gallus
 ENSGALG00000036234Gallus gallus
 RFWD3ENSG00000168411Homo sapiens
 Rfwd3ENSMUSG00000033596Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0036297 interstrand cross-link repair IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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