ENSDARG00000087893


Danio rerio

Features
Gene ID: ENSDARG00000087893
  
Biological name :rnf216
  
Synonyms : ring finger protein 216 / rnf216
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF216 / P58283 / Q9NWF9
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 40600770
Gene end: 40664913
  
Corresponding Affymetrix probe sets: Dr.6875.1.A1_at (Zebrafish Array)   XM_682779_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000144094
Ensembl peptide - ENSDARP00000117304
Ensembl peptide - ENSDARP00000146465
NCBI entrez gene - 559441     See in Manteia.
RefSeq - XM_682779
swissprot - E7F859
ZFIN ID - ZDB-GENE-081104-199
Ensembl - ENSDARG00000087893
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF216ENSGALG00000004629Gallus gallus
 Q9NWF9ENSG00000011275Homo sapiens
 P58283ENSMUSG00000045078Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021549 cerebellum development IMP
 biological_processGO:0043010 camera-type eye development IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000100 cerebellum cerebellum disorganized , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000445 optic tectum optic tectum decreased size , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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