ENSDARG00000089260


Danio rerio
trnadus1lsynthasedihydrouridineactivitytrna-dihydrouridinealdolase-typetimbarreldus-likefmn-bindingdomainsynthesisprocessingoxidation-reductionprocesscellularcomponentcatalyticflavinadeninedinucleotidebinding

Features
Gene ID: ENSDARG00000089260
  
Biological name :dus1l
  
Synonyms : dihydrouridine synthase 1-like (S. cerevisiae) / dus1l
  
Possible biological names infered from orthology : dihydrouridine synthase 1 like / Q6P1R4 / Q8C2P3 / tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 36222799
Gene end: 36232653
  
Corresponding Affymetrix probe sets: Dr.12636.1.A1_at (Zebrafish Array)   NM_199617_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000100228
NCBI entrez gene - 322715     See in Manteia.
RefSeq - NM_199617
RefSeq - XM_005163994
RefSeq Peptide - NP_955911
swissprot - B0S7L0
ZFIN ID - ZDB-GENE-030131-1435
Ensembl - ENSDARG00000089260
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DUS1LENSGALG00000034115Gallus gallus
 DUS1LENSG00000169718Homo sapiens
 Dus1lENSMUSG00000025155Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001269  tRNA-dihydrouridine synthase
 IPR013785  Aldolase-type TIM barrel
 IPR035587  DUS-like, FMN-binding domain


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processoxidation-reduction processnitrogen compound metabolic nitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic processoxidation-reduction processoxidation-reduction process
oxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activitycatalytic activity, acting on RNAion bindingorganic cyclic compound bindingheterocyclic compound bindingcofactor bindingsmall molecule bindingoxidoreductase activoxidoreductase activitycatalytic activity, catalytic activity, acting on RNAion bindingion bindingorganic cyclic compoorganic cyclic compound bindingheterocyclic compounheterocyclic compound bindingcofactor bindingcofactor bindingsmall molecule bindismall molecule binding
TypeGO IDTermEv.Code
 biological_processGO:0002943 tRNA dihydrouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0017150 tRNA dihydrouridine synthase activity IBA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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