ENSDARG00000089310


Danio rerio
vitamingcserumtransmembranetransportextracellulardd-bindingproteinalbafpvdbalbuminn-terminalalbumin-likeregionspacebindingtransporteractivitycalciferolmetabolism

Features
Gene ID: ENSDARG00000089310
  
Biological name :gc
  
Synonyms : gc / group-specific component (vitamin D binding protein)
  
Possible biological names infered from orthology : GC, vitamin D binding protein / P02774 / P21614 / Vitamin D-binding protein
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 45677781
Gene end: 45725008
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106674
Ensembl peptide - ENSDARP00000140156
NCBI entrez gene - 436841     See in Manteia.
RefSeq - NM_001002568
RefSeq Peptide - NP_001002568
swissprot - F1QM90
swissprot - A0A0R4ITN2
ZFIN ID - ZDB-GENE-040718-307
Ensembl - ENSDARG00000089310
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GCENSGALG00000011612Gallus gallus
 GCENSG00000145321Homo sapiens
 GcENSMUSG00000035540Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000213  Vitamin D-binding protein
 IPR000264  ALB/AFP/VDB
 IPR014760  Serum albumin, N-terminal
 IPR020858  Serum albumin-like


Gene Ontology (GO)
establishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localizationestablishment of localization
lipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindingorganic cyclic compound bindingsmall molecule bindingtransmembrane transporter activitylipid bindinglipid bindingorganic cyclic compound bindingorganic cyclic compound bindingsmall molecule bindingsmall molecule bindingtransmembrane transporter activitytransmembrane transporter activity
extracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular regionextracellular region
TypeGO IDTermEv.Code
 biological_processGO:0035461 vitamin transmembrane transport IEA
 biological_processGO:0051180 vitamin transport IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 molecular_functionGO:0005499 vitamin D binding IEA
 molecular_functionGO:0090482 vitamin transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Vitamin D (calciferol) metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr