ENSDARG00000089368


Danio rerio

Features
Gene ID: ENSDARG00000089368
  
Biological name :hopx
  
Synonyms : HOP homeobox / hopx / Q8AYB8
  
Possible biological names infered from orthology : Homeodomain-only protein / Q8R1H0 / Q9BPY8
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 1170968
Gene end: 1178359
  
Corresponding Affymetrix probe sets: DrAffx.1.70.S1_at (Zebrafish Array)   NM_198209_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000112208
Ensembl peptide - ENSDARP00000156504
NCBI entrez gene - 386589     See in Manteia.
RefSeq - NM_198209
RefSeq Peptide - NP_937852
swissprot - Q8AYB8
ZFIN ID - ZDB-GENE-031016-2
Ensembl - ENSDARG00000089368
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOPXENSGALG00000011404Gallus gallus
 HOPXENSG00000171476Homo sapiens
 HopxENSMUSG00000059325Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007507 heart development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium broken , abnormal
pericardium edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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