ENSDARG00000089517


Danio rerio

Features
Gene ID: ENSDARG00000089517
  
Biological name :zgc:92594
  
Synonyms : zgc:92594
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 73829477
Gene end: 73834812
  
Corresponding Affymetrix probe sets: Dr.16184.1.A1_at (Zebrafish Array)   Dr.17698.1.S1_s_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000107416
swissprot - F1R3Q1
ZFIN ID - ZDB-GENE-040718-482
Ensembl - ENSDARG00000089517
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000001206Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim8b / tripartite motif containing 8b / TRIM8* / Q9BZR9* / Q99PJ2* / tripartite motif containing 8* / Probable E3 ubiquitin-protein ligase TRIM8 *ENSDARG0000006072919
ftr69 / finTRIM family, member 69ENSDARG0000005264618
trim8a / tripartite motif containing 8a / TRIM8* / Q9BZR9* / tripartite motif containing 8*ENSDARG0000009051218
ftr73 / finTRIM family, member 73ENSDARG0000009529818
ftr87 / finTRIM family, member 87ENSDARG0000010255717
trim110 / tripartite motif containing 110ENSDARG0000006824016


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr