ENSDARG00000089767


Danio rerio

Features
Gene ID: ENSDARG00000089767
  
Biological name :rnf130
  
Synonyms : ring finger protein 130 / rnf130
  
Possible biological names infered from orthology : Q86XS8 / Q8VEM1
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 36765612
Gene end: 36863432
  
Corresponding Affymetrix probe sets: Dr.14028.1.A1_at (Zebrafish Array)   Dr.5975.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000101069
Ensembl peptide - ENSDARP00000134816
Ensembl peptide - ENSDARP00000134235
NCBI entrez gene - 553950     See in Manteia.
RefSeq - NM_001020465
RefSeq Peptide - NP_001018301
swissprot - A0A0R4IHR4
swissprot - A0A0R4IGH0
swissprot - E7FCE1
swissprot - Q501T3
ZFIN ID - ZDB-GENE-050522-525
Ensembl - ENSDARG00000089767
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF130ENSGALG00000005820Gallus gallus
 Q86XS8ENSG00000113269Homo sapiens
 Q8VEM1ENSMUSG00000020376Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf150a / ring finger protein 150a / Q5DTZ6* / Q9ULK6* / RNF150* / ring finger protein 150*ENSDARG0000002482744
Q566M8 / rnf150b / ring finger protein 150b / Q9ULK6* / RNF150* / Q5DTZ6* / ring finger protein 150*ENSDARG0000000952439
rnf128a / ring finger protein 128a / Q8N7C7* / Q8TEB7* / Q8WVZ7* / Q9D304* / RNF148* / G3X9R7* / Q14B02* / RNF128* / RNF133* / ring finger protein 148* / ring finger protein 133* / E3 ubiqu...ENSDARG0000001686728
si:dkeyp-86f7.4 / Q14B02* / Q8N7C7* / Q8TEB7* / Q8WVZ7* / Q9D304* / G3X9R7* / RNF128* / RNF133* / RNF148* / ring finger protein 148* / ring finger protein 133* / E3 ubiquitin-protein ligase...ENSDARG0000002989022
rnf13 / ring finger protein 13 / O43567* / O54965*ENSDARG0000001943817
znrf3 / zinc and ring finger 3 / Q5SSZ7* / Q9ULT6*ENSDARG0000006257317
rnf167 / ring finger protein 167 / ZNRF4* / Q9H6Y7* / Q8WWF5* / zinc and ring finger 4*ENSDARG0000001763614
rnf215 / ring finger protein 215 / Q5SPX3* / Q9Y6U7*ENSDARG0000005942413


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003137  PA domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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