ENSDARG00000090160


Danio rerio

Features
Gene ID: ENSDARG00000090160
  
Biological name :si:dkey-156k2.3
  
Synonyms : si:dkey-156k2.3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 49821234
Gene end: 49952636
  
Corresponding Affymetrix probe sets: Dr.6117.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000153506
Ensembl peptide - ENSDARP00000154589
Ensembl peptide - ENSDARP00000156631
Ensembl peptide - ENSDARP00000125566
Ensembl peptide - ENSDARP00000131578
Ensembl peptide - ENSDARP00000146475
NCBI entrez gene - 100002234     See in Manteia.
NCBI entrez gene - 100191016     See in Manteia.
RefSeq - NM_001135989
RefSeq - XM_017355673
RefSeq Peptide - NP_001129461
swissprot - A8KBM3
swissprot - H0WFD4
ZFIN ID - ZDB-GENE-110913-19
Ensembl - ENSDARG00000090160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-258f1.3ENSDARG0000010511982
si:dkey-22a18.2ENSDARG0000009840681
si:dkeyp-35e5.5ENSDARG0000010402681
si:dkey-190j3.4ENSDARG0000010074378
si:dkeyp-4c4.2ENSDARG0000011619777
si:dkey-165o8.2ENSDARG0000010495675
si:ch211-238e22.7ENSDARG0000010077774
si:ch211-171l17.4 / si:dkeyp-123a12.2 / si:ch211-171l17.14ENSDARG0000011502974
si:dkey-3h2.2ENSDARG0000011081073
si:dkey-28k24.2ENSDARG0000009510672
si:dkey-176f19.4ENSDARG0000009816772
si:ch211-209j12.6ENSDARG0000009822072
si:ch211-66c13.1ENSDARG0000009835172
si:ch211-229l10.4ENSDARG0000009835772
si:dkey-190j3.2 / si:ch211-271g18.1ENSDARG0000009915272
si:dkey-179k24.5ENSDARG0000010226272
si:dkey-105i14.1ENSDARG0000007769771
si:ch211-199m9.2 / si:ch211-196f19.1ENSDARG0000010338171
si:dkey-22a18.2 / si:ch211-223g7.6 / si:ch211-271g18.1ENSDARG0000011369071
si:dkeyp-44d3.5 / si:dkey-124l13.1ENSDARG0000010191668


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR004020  DAPIN domain
 IPR006574  SPRY-associated
 IPR007111  NACHT nucleoside triphosphatase
 IPR011029  Death-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029495  NACHT-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr