ENSDARG00000090770


Danio rerio

Features
Gene ID: ENSDARG00000090770
  
Biological name :FO834800.1
  
Synonyms : FO834800.1
  
Possible biological names infered from orthology : AL136295.5 / E3 ubiquitin-protein ligase RNF31 / Q924T7 / Q96EP0 / ring finger protein 31 / RNF31
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 27811038
Gene end: 27855576
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109107
swissprot - E7F0V6
Ensembl - ENSDARG00000090770
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AL136295.5ENSG00000259529Homo sapiens
 RNF31ENSG00000092098Homo sapiens
 Rnf31ENSMUSG00000047098Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FO834800.2 / RNF31* / Q96EP0* / AL136295.5* / ring finger protein 31*ENSDARG0000011305726
si:dkey-181m9.8ENSDARG0000007826717


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001876  Zinc finger, RanBP2-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR018997  PUB domain
 IPR026254  E3 ubiquitin-protein ligase RNF31
 IPR032065  E3 ubiquitin-protein ligase RNF31, UBA-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0071797 LUBAC complex IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr